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1

An imprecise path to precision medicine

Journal:

Nature Medicine

Year:

2020

Language:

english

File:

PDF, 603 KB

english, 2020

2

Opportunities and Challenges for Single-Unit Recordings from Enteric Neurons in Awake Animals

Barth, Bradley, Huang, Hsin-I, Hammer, Gianna, Shen, Xiling

Journal:

Year:

2018

Language:

english

File:

PDF, 1018 KB

english, 2018

3

A gut-brain neural circuit for nutrient sensory transduction

Kaelberer, Melanie Maya, Buchanan, Kelly L., Klein, Marguerita E., Barth, Bradley B., Montoya, Marcia M., Shen, Xiling, Bohórquez, Diego V.

Journal:

Year:

2018

Language:

english

File:

PDF, 1.80 MB

english, 2018

4

In Vitro Study on DNA Binding of Ruthenium(II) Complexes with Polypyridyl Ligands

Tan, Li-Feng, Shen, JianLiang, Chen, XueJiao, Liang, XiLing

Journal:

DNA and Cell Biology

Year:

2009

Language:

english

File:

PDF, 5.55 MB

english, 2009

5

Targeted drug delivery to circulating tumor cells via platelet membrane-functionalized particles

Li, Jiahe, Ai, Yiwei, Wang, Lihua, Bu, Pengcheng, Sharkey, Charles C., Wu, Qianhui, Wun, Brittany, Roy, Sweta, Shen, Xiling, King, Michael R.

Journal:

Year:

2015

Language:

english

File:

PDF, 3.81 MB

english, 2015

6

FDA Approval Summary: Atezolizumab plus bevacizumab for the treatment of patients with advanced unresectable or metastatic hepatocellular carcinoma

Casak, Sandra J, Donoghue, Martha, Fashoyin-Aje, Lola, Jiang, Xiaoping, Rodriguez, Lisa, Shen, Yuan Li, Xu, Yuan, Jiang, Xiling, Liu, Jiang, Zhao, Hong, Pierce, William F, Mehta, Shubhangi, Goldberg,

Journal:

Clinical Cancer Research

Year:

2020

File:

PDF, 787 KB

2020

7

A real-time spike classification method based on dynamic time warping for extracellular enteric neural recording with large waveform variability

Cao, Yingqiu, Rakhilin, Nikolai, Gordon, Philip H., Shen, Xiling, Kan, Edwin C.

Journal:

Journal of Neuroscience Methods

Year:

2016

Language:

english

File:

PDF, 2.35 MB

english, 2016

8

[IEEE 2018 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) - Honolulu, HI, USA (2018.7.18-2018.7.21)] 2018 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) - Microbiota of Inflammatory Bowel Disease Models

Gao, Ziyang, Chen, Kai-Yuan, Mueller, Olaf, Zhang, Han, Rakhilin, Nikolai, Chen, Jiande, Shen, Xiling

Year:

2018

Language:

english

File:

PDF, 1.74 MB

english, 2018

9

P076 MICRORNA SAFEGUARDING THE INFLAMMATORY COLON STEM CELL NICHE

Journal:

Inflammatory Bowel Diseases

Year:

2018

Language:

english

File:

PDF, 547 KB

english, 2018

10

Transcriptomic and anatomic profiling reveal the germination process of different wheat varieties in response to waterlogging stress

Shen, Changwei, Yuan, Jingping, Qiao, Hong, Wang, Zijuan, Liu, Yuanhai, Ren, Xiujuan, Wang, Fei, Liu, Xing, Zhang, Ying, Chen, Xiling, Ou, Xingqi

Journal:

Year:

2020

File:

PDF, 3.71 MB

2020

11

Compensation for multimode fiber dispersion by adaptive optics

Shen, Xiling, Kahn, Joseph M., Horowitz, Mark A.

Journal:

Year:

2005

Language:

english

File:

PDF, 96 KB

english, 2005

12

[IEEE 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) - Chicago, IL (2014.8.26-2014.8.30)] 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society - A metabolic signature of colon cancer initiating cells

Kai-Yuan Chen,, Xiaojing Liu,, Pengcheng Bu,, Chieh-Sheng Lin,, Rakhilin, Nikolai, Locasale, Jason W., Xiling Shen,

Year:

2014

Language:

english

File:

PDF, 1.16 MB

english, 2014

13

SAR Image Despeckling by the Use of Variational Methods With Adaptive Nonlocal Functionals

Ma, Xiaoshuang, Shen, Huanfeng, Zhao, Xile, Zhang, Liangpei

Journal:

IEEE Transactions on Geoscience and Remote Sensing

Year:

2016

Language:

english

File:

PDF, 6.13 MB

english, 2016

14

[IEEE 2018 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) - Honolulu, HI, USA (2018.7.18-2018.7.21)] 2018 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) - Spatial Patterning from an Integrated Wnt/β-catenin and Notch/Delta Gene Circuit

Mines, Robert C., Dohlman, Anders, Lim, Sze-Xian, Tung, Kuei-Ling, Wang, Ergang, Shen, Xiling

Year:

2018

Language:

english

File:

PDF, 1.13 MB

english, 2018

15

Author Correction: Intestinal crypts recover rapidly from focal damage with coordinated motion of stem cells that is impaired by aging

Choi, Jiahn, Rakhilin, Nikolai, Gadamsetty, Poornima, Joe, Daniel J., Tabrizian, Tahmineh, Lipkin, Steven M., Huffman, Derek M., Shen, Xiling, Nishimura, Nozomi

Journal:

Scientific Reports

Year:

2019

Language:

english

File:

PDF, 629 KB

english, 2019

16

Hydrogen sulfide attenuates inflammatory hepcidin by reducing IL-6 secretion and promoting SIRT1-mediated STAT3 deacetylation

Xin, Hong, Wang, Minjun, Tang, Wenbo, Shen, Zhuqing, Miao, Lei, Wu, Weijun, Li, Chengyi, Wang, xiling, Xin, Xiaoming, zhu, yizhun

Journal:

Antioxidants & Redox Signaling

Year:

2015

Language:

english

File:

PDF, 1.79 MB

english, 2015

17

Exploitation of Synthetic mRNA To Drive Immune Effector Cell Recruitment and Functional Reprogramming In Vivo

Xu, Yitian, Huang, Lu, Kirschman, Jonathan L., Vanover, Daryll A., Tiwari, Pooja M., Santangelo, Philip J., Shen, Xiling, Russell, David G.

Journal:

The Journal of Immunology

Year:

2018

Language:

english

File:

PDF, 1.82 MB

english, 2018

18

The Ex Vivo Culture and Pattern Recognition Receptor Stimulation of Mouse Intestinal Organoids

Rothschild, Daniel E., Srinivasan, Tara, Aponte-Santiago, Linette A., Shen, Xiling, Allen, Irving C.

Journal:

Journal of Visualized Experiments

Year:

2016

Language:

english

File:

PDF, 689 KB

english, 2016

19

Computational motility models of neurogastroenterology and neuromodulation

Barth, Bradley B., Shen, Xiling

Journal:

Year:

2018

Language:

english

File:

PDF, 738 KB

english, 2018

20

Mapping the microbial interactome: Statistical and experimental approaches for microbiome network inference

Dohlman, Anders B, Shen, Xiling

Journal:

Experimental Biology and Medicine

Year:

2019

Language:

english

File:

PDF, 389 KB

english, 2019

21

[IEEE 2012 34th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) - San Diego, CA (2012.8.28-2012.9.1)] 2012 Annual International Conference of the IEEE Engineering in Medicine and Biology Society - Using an adaptive gene network model for self-organizing multicellular behavior

Yong-Jun Shin,, Sayed, A. H., Xiling Shen,

Year:

2012

Language:

english

File:

PDF, 498 KB

english, 2012

22

A metabolic signature of colon cancer initiating cells

Johnson, Christelle, Chen, Kai-Yuan, Liu, Xiaojing, Bu, Pengcheng, Locasale, Jason, Shen, Xiling

Journal:

Cancer & Metabolism

Year:

2014

Language:

english

File:

PDF, 74 KB

english, 2014

23

Post-translational regulation enables robust p53 regulation

Shin, Yong-Jun, Chen, Kai-Yuan, Sayed, Ali H, Hencey, Brandon, Shen, Xiling

Journal:

BMC Systems Biology

Year:

2013

Language:

english

File:

PDF, 738 KB

english, 2013

24

Video Recognition of Human Fall Based on Spatiotemporal Features

Wang, Kai, Zhao, Youjin, Xiong, Qingyu, Shen, Xiling, Fan, Min, Gao, Min

Journal:

Intelligent Automation & Soft Computing

Year:

2015

Language:

english

File:

PDF, 1.78 MB

english, 2015

25

Development of a precision medicine pipeline to identify personalized treatments for colorectal cancer

Altunel, Erdem, Roghani, Roham S., Chen, Kai-Yuan, Kim, So Young, McCall, Shannon, Ware, Kathryn E., Shen, Xiling, Somarelli, Jason A., Hsu, David S.

Journal:

Year:

2020

File:

PDF, 3.73 MB

2020

26

Notch signalling regulates asymmetric division and inter-conversion between lgr5 and bmi1 expressing intestinal stem cells

Srinivasan, Tara, Than, Elaine Bich, Bu, Pengcheng, Tung, Kuei-Ling, Chen, Kai-Yuan, Augenlicht, Leonard, Lipkin, Steven M., Shen, Xiling

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 1.07 MB

english, 2016

27

[ACM Press the 48th Design Automation Conference - San Diego, California (2011.06.05-2011.06.10)] Proceedings of the 48th Design Automation Conference on - DAC '11 - Joint DAC/IWBDA special session design and synthesis of biological circuits

Densmore, Douglas, Horowitz, Mark, Krishnaswamy, Smita, Shen, Xiling, Arkin, Adam, Winfree, Erik, Voigt, Chris

Year:

2011

Language:

english

File:

PDF, 159 KB

english, 2011

28

An essential transcription factor, SciP, enhances robustness of Caulobacter cell cycle regulation

Meng How Tan, Jennifer B. Kozdon, Xiling Shen, Lucy Shapiro and Harley H. McAdams

Journal:

Proceedings of the National Academy of Sciences

Year:

2010

Language:

english

File:

PDF, 1.38 MB

english, 2010

29

Abnormal Regional Body Fat Distribution Also Exists in Non-Obese Subjects with High Blood Pressure

Yan, Sunjie, Zhao, Xile, Shen, Ximei, Yang, Liyong, Yuan, Xin, Huang, Lingning, Zhang, Songjing

Journal:

Clinical and Experimental Hypertension

Year:

2013

Language:

english

File:

PDF, 198 KB

english, 2013

30

Copy number variation of functional RBMY1 is associated with sperm motility: an azoospermia factor-linked candidate for asthenozoospermia

Yan, Yuanlong, Yang, Xiling, Liu, Yunqiang, Shen, Ying, Tu, Wenling, Dong, Qiang, Yang, Dong, Ma, Yongyi, Yang, Yuan

Journal:

Human Reproduction

Year:

2017

Language:

english

File:

PDF, 642 KB

english, 2017

31

Chemokine 25–induced signaling suppresses colon cancer invasion and metastasis

Chen, Huanhuan Joyce, Edwards, Robert, Tucci, Serena, Bu, Pengcheng, Milsom, Jeff, Lee, Sang, Edelmann, Winfried, Gümüs, Zeynep H., Shen, Xiling, Lipkin, Steven

Journal:

Journal of Clinical Investigation

Year:

2012

Language:

english

File:

PDF, 4.72 MB

english, 2012

32

Integrated chromatin and transcriptomic profiling of patient-derived colon cancer organoids identifies personalized drug targets to overcome oxaliplatin resistance

Tung, Kuei-Ling, Chen, Kai-Yuan, Negrete, Marcos, Chen, Tianyi, Safi, Alexias, Aljamal, Abed Alhalim, Song, Lingyun, Crawford, Gregory E., Ding, Shengli, Hsu, David S., Shen, Xiling

Journal:

Genes & Diseases

Year:

2019

File:

PDF, 1.95 MB

2019

33

[IEEE 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) - Chicago, IL (2014.8.26-2014.8.30)] 2014 36th Annual International Conference of the IEEE Engineering in Medicine and Biology Society - A bio-inspired spatial patterning circuit

Kai-Yuan Chen,, Joe, Danial J., Shealy, James B., Land, Bruce R., Xiling Shen,

Year:

2014

Language:

english

File:

PDF, 991 KB

english, 2014

34

Hybrid Microrna Control of Colon Cancer Stem Cell Asymmetric Division

Journal:

Biophysical Journal

Year:

2015

Language:

english

File:

PDF, 39 KB

english, 2015

35

Evidence for the involvement of the proximal copy of the MAGEA9 gene in Xq28-linked CNV67 specific to spermatogenic failure†

Shen, Ying, Xu, Jinyan, Yang, Xiling, Liu, Yunqiang, Ma, Yongyi, Yang, Dong, Dong, Qiang, Yang, Yuan

Journal:

Biology of Reproduction

Year:

2017

Language:

english

File:

PDF, 770 KB

english, 2017

36

Intestinal crypts recover rapidly from focal damage with coordinated motion of stem cells that is impaired by aging

Choi, Jiahn, Rakhilin, Nikolai, Gadamsetty, Poornima, Joe, Daniel J., Tabrizian, Tahmineh, Lipkin, Steven M., Huffman, Derek M., Shen, Xiling, Nishimura, Nozomi

Journal:

Scientific Reports

Year:

2018

Language:

english

File:

PDF, 6.83 MB

english, 2018

37

IRE1α is an endogenous substrate of endoplasmic-reticulum-associated degradation

Sun, Shengyi, Shi, Guojun, Sha, Haibo, Ji, Yewei, Han, Xuemei, Shu, Xin, Ma, Hongming, Inoue, Takamasa, Gao, Beixue, Kim, Hana, Bu, Pengcheng, Guber, Robert D., Shen, Xiling, Lee, Ann-Hwee, Iwawaki, T

Journal:

Nature Cell Biology

Year:

2015

Language:

english

File:

PDF, 17.16 MB

english, 2015

38

Epigenetics and cancer metabolism

Johnson, Christelle, Warmoes, Marc O., Shen, Xiling, Locasale, Jason W.

Journal:

Year:

2015

Language:

english

File:

PDF, 767 KB

english, 2015

39

Surface Functionalized Graphene Biosensor on Sapphire for Cancer Cell Detection

Joe, Daniel J., Hwang, Jeonghyun, Johnson, Christelle, Cha, Ho-Young, Lee, Jo-Won, Shen, Xiling, Spencer, Michael G., Tiwari, Sandip, Kim, Moonkyung

Journal:

Journal of Nanoscience and Nanotechnology

Year:

2016

Language:

english

File:

PDF, 389 KB

english, 2016

40

725 - Sensory Synaptic Transduction from Gut to Brain

Kaelberer, Melanie M., Buchanan, Kelly, Klein, Marguerita, Montoya, Marcia, Barth, Bradley, Shen, Xiling, Bohórquez, Diego V.

Journal:

Gastroenterology

Year:

2018

Language:

english

File:

PDF, 146 KB

english, 2018

41

The Role of 5-aza-2′-Deoxycytidine on Methylation Status of Xist Gene in Different Genders of Buffalo ( Bubalus bubalis ) Bone Marrow Mesenchymal Stem Cells

Zhao, Xin, Ruan, Ziyun, Qin, Xiling, Feng, Yun, Yu, Qing, Xu, Jie, Deng, Yanfei, Shen, Penglei, Shi, Deshun, Lu, Fenghua

Journal:

Cellular Reprogramming (Formerly "Cloning and Stem Cells")

Year:

2019

File:

PDF, 851 KB

2019

42

Electrical stimulation of gut motility guided by an in silico model

Barth, Bradley Brigham, Henriquez, Craig S, Grill, Warren M, Shen, Xiling

Journal:

Journal of Neural Engineering

Year:

2017

Language:

english

File:

PDF, 1.07 MB

english, 2017

43

Adaptive Models for Gene Networks

Shin, Yong-Jun, Sayed, Ali H., Shen, Xiling, Isalan, Mark

Journal:

Year:

2012

Language:

english

File:

PDF, 245 KB

english, 2012

44

[IEEE 2018 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) - Honolulu, HI, USA (2018.7.18-2018.7.21)] 2018 40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) - Single-Cell Transcriptomics Reveals Heterogeneity and Drug Response of Human Colorectal Cancer Organoids

Chen, Kai-Yuan, Srinivasan, Tara, Lin, Christopher, Tung, Kuei-Ling, Gao, Ziyang, Hsu, David S., Lipkin, Steven M., Shen, Xiling

Year:

2018

Language:

english

File:

PDF, 3.71 MB

english, 2018

45

P076 MICRORNA SAFEGUARDING THE INFLAMMATORY COLON STEM CELL NICHE

Journal:

Inflammatory Bowel Diseases

Year:

2018

File:

PDF, 547 KB

2018

46

Strategy for the Quantitation of a Protein Conjugate via Hybrid Immunocapture-Liquid Chromatography with Sequential HRMS and SRM-Based LC-MS/MS Analyses

Zhao, Yue, Liu, Guowen, Yuan, Xiling, Gan, Jinping, Peterson, Jon E., Shen, Jim X.

Journal:

Analytical Chemistry

Year:

2017

Language:

english

File:

PDF, 473 KB

english, 2017

47

Cognitive Radio Networks With Primary Receiver Assisted Interference Avoidance Protocol

Song, Xiaoshi, Meng, Xiangbo, Shen, Xile, Jia, Chao

Journal:

Year:

2018

Language:

english

File:

PDF, 5.90 MB

english, 2018

48

P076 MICRORNA SAFEGUARDING THE INFLAMMATORY COLON STEM CELL NICHE

Journal:

Gastroenterology

Year:

2018

Language:

english

File:

PDF, 401 KB

english, 2018

49

A long non-coding RNA targets microRNA miR-34a to regulate colon cancer stem cell asymmetric division

Wang, Lihua, Bu, Pengcheng, Ai, Yiwei, Srinivasan, Tara, Chen, Huanhuan Joyce, Xiang, Kun, Lipkin, Steven M, Shen, Xiling

Journal:

Year:

2016

Language:

english

File:

PDF, 2.76 MB

english, 2016

50

Asymmetric division: An antitumor player?

Wang, Lihua, Bu, Pengcheng, Shen, Xiling

Journal:

Molecular & Cellular Oncology

Year:

2016

Language:

english

File:

PDF, 1.68 MB

english, 2016

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